Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 AL603832.2-201ENST00000566195 2125 ntBASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 LINC00265-3P-201ENST00000447588 903 ntBASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 MINOS1P3-201ENST00000457048 203 ntBASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 MIR3180-1-201ENST00000580374 94 ntBASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 MIR3180-3-201ENST00000584616 94 ntBASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 AC243591.1-201ENST00000452967 1364 ntBASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHAMP1Q96JM3 MTHFR-217ENST00000641820 1569 ntBASIC19.52■□□□□ 0.71
CHAMP1Q96JM3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHAMP1Q96JM3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHAMP1Q96JM3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHAMP1Q96JM3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHAMP1Q96JM3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHAMP1Q96JM3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 AC092384.3-202ENST00000564646 2873 ntBASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 AL020989.1-201ENST00000422979 469 ntBASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 ACTG1P4-201ENST00000425123 1122 ntBASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 AC093458.2-201ENST00000623150 629 ntBASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 AC116407.4-201ENST00000623319 1061 ntBASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.51■□□□□ 0.71
CHAMP1Q96JM3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 DRAXINP1-201ENST00000437611 948 ntBASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 SIGLEC30P-201ENST00000455569 941 ntBASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms