Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 AC021087.4-201ENST00000563761 564 ntBASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 AC006557.2-201ENST00000592985 1240 ntBASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 AL603756.1-201ENST00000606511 2163 ntBASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 LAGE3P1-201ENST00000425356 484 ntBASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 AC073648.2-201ENST00000510116 352 ntBASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 AC025062.2-201ENST00000605477 670 ntBASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP1Q8TDR0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 HLA-A-202ENST00000376806 1854 ntBASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAF3IP1Q8TDR0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms