Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 AC069335.1-201ENST00000489972 472 ntBASIC16.87■□□□□ 0.29
CHD5Q8TDI0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD5Q8TDI0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 FAM86C2P-203ENST00000528684 1004 ntBASIC16.86■□□□□ 0.29
CHD5Q8TDI0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 ME2P1-201ENST00000426028 1970 ntBASIC16.86■□□□□ 0.29
CHD5Q8TDI0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 AC245100.5-201ENST00000452108 331 ntBASIC16.86■□□□□ 0.29
CHD5Q8TDI0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 AC027307.2-201ENST00000591252 911 ntBASIC16.86■□□□□ 0.29
CHD5Q8TDI0 AC020765.3-201ENST00000613051 740 ntBASIC16.86■□□□□ 0.29
CHD5Q8TDI0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD5Q8TDI0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 AC142381.1-201ENST00000426099 345 ntBASIC16.85■□□□□ 0.29
CHD5Q8TDI0 FAM58DP-201ENST00000428076 619 ntBASIC16.85■□□□□ 0.29
CHD5Q8TDI0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 MTHFR-217ENST00000641820 1569 ntBASIC16.85■□□□□ 0.29
CHD5Q8TDI0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHD5Q8TDI0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms