Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.34■□□□□ 0.53
KLHDC9Q8NEP7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KLHDC9Q8NEP7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 SLC7A15P-201ENST00000424028 1363 ntBASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHDC9Q8NEP7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 AC011495.1-201ENST00000498085 584 ntBASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 AC017083.2-201ENST00000608069 979 ntBASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 MIR6799-201ENST00000620297 69 ntBASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
KLHDC9Q8NEP7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 SPDYE17-201ENST00000412399 783 ntBASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHDC9Q8NEP7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 KRT8P12-202ENST00000472924 1397 ntBASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 AC112492.5-201ENST00000421897 457 ntBASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 SRD5A3P1-201ENST00000603021 949 ntBASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 AL390961.4-201ENST00000623958 2535 ntBASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHDC9Q8NEP7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms