Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC091167.2-201ENST00000579581 588 ntBASIC17.1■□□□□ 0.33
CHPFQ8IZ52 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.1■□□□□ 0.33
CHPFQ8IZ52 AL136317.3-201ENST00000618497 906 ntBASIC17.1■□□□□ 0.33
CHPFQ8IZ52 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 AC092474.2-201ENST00000424288 719 ntBASIC17.09■□□□□ 0.33
CHPFQ8IZ52 FAM58DP-201ENST00000428076 619 ntBASIC17.09■□□□□ 0.33
CHPFQ8IZ52 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 AC087641.1-201ENST00000557561 1021 ntBASIC17.09■□□□□ 0.33
CHPFQ8IZ52 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 AP001350.2-201ENST00000625104 1094 ntBASIC17.09■□□□□ 0.33
CHPFQ8IZ52 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 UXT-AS1-201ENST00000590504 1525 ntBASIC17.09■□□□□ 0.33
CHPFQ8IZ52 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHPFQ8IZ52 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CHPFQ8IZ52 SLC22A20-204ENST00000530038 1673 ntBASIC17.08■□□□□ 0.32
CHPFQ8IZ52 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 BCRP1-201ENST00000444246 691 ntBASIC17.08■□□□□ 0.32
CHPFQ8IZ52 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 AC015911.4-201ENST00000588022 1070 ntBASIC17.08■□□□□ 0.32
CHPFQ8IZ52 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 AC005498.2-205ENST00000593218 784 ntBASIC17.08■□□□□ 0.32
CHPFQ8IZ52 AL031055.1-201ENST00000606362 631 ntBASIC17.08■□□□□ 0.32
CHPFQ8IZ52 AL096865.1-201ENST00000606796 927 ntBASIC17.08■□□□□ 0.32
CHPFQ8IZ52 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHPFQ8IZ52 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CHPFQ8IZ52 WASH6P-202ENST00000359512 1437 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms