Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 AC010491.1-201ENST00000563101 2797 ntBASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 AC142086.2-201ENST00000569753 217 ntBASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 RN7SL471P-201ENST00000580476 299 ntBASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 AC007191.1-201ENST00000623179 2995 ntBASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 LINC01101-201ENST00000622953 1884 ntBASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CROCCP3Q8IVE0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 OR2I1P-209ENST00000641730 5365 ntBASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 AC097488.1-201ENST00000507834 756 ntBASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms