Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 PDPK2P-202ENST00000562415 1191 ntBASIC16.13■□□□□ 0.17
RAB43Q86YS6 MIR4469-201ENST00000583919 79 ntBASIC16.13■□□□□ 0.17
RAB43Q86YS6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 AC004877.2-201ENST00000623941 599 ntBASIC16.13■□□□□ 0.17
RAB43Q86YS6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 AC023141.13-201ENST00000604991 943 ntBASIC16.12■□□□□ 0.17
RAB43Q86YS6 AL078644.1-201ENST00000609881 752 ntBASIC16.12■□□□□ 0.17
RAB43Q86YS6 AL596442.2-201ENST00000610240 980 ntBASIC16.12■□□□□ 0.17
RAB43Q86YS6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAB43Q86YS6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB43Q86YS6 PCDHB19P-201ENST00000570871 2371 ntBASIC16.12■□□□□ 0.17
RAB43Q86YS6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 AC254562.1-201ENST00000417586 456 ntBASIC16.11■□□□□ 0.17
RAB43Q86YS6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 KRT19P2-202ENST00000557173 1012 ntBASIC16.11■□□□□ 0.17
RAB43Q86YS6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 LINC01451-201ENST00000623792 534 ntBASIC16.11■□□□□ 0.17
RAB43Q86YS6 AL590787.1-201ENST00000568856 1315 ntBASIC16.11■□□□□ 0.17
RAB43Q86YS6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
RAB43Q86YS6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB43Q86YS6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms