Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 AP000867.3-201ENST00000524675 377 ntBASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 BNIP3P18-201ENST00000593976 575 ntBASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 AP000550.4-202ENST00000639755 178 ntBASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 PMPCAP1-201ENST00000508114 1576 ntBASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 RCN1P2-201ENST00000398357 915 ntBASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 ACTG1P4-201ENST00000425123 1122 ntBASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AP002383.4-201ENST00000442518 975 ntBASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AC012615.1-201ENST00000565797 1299 ntBASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AC092329.2-201ENST00000598402 547 ntBASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 FRMD8P1-201ENST00000440433 1524 ntBASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MRPL55Q7Z7F7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms