Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2AQ7L7L0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 SCARNA2-201ENST00000458748 420 ntBASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.38■□□□□ 0.05
HIST3H2AQ7L7L0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 AC064862.7-201ENST00000604520 867 ntBASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 AL353135.1-201ENST00000606729 504 ntBASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 AL589182.2-201ENST00000619332 1049 ntBASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2AQ7L7L0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms