Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CCNI2Q6ZMN8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 AL031284.1-201ENST00000419297 478 ntBASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 BX842568.4-201ENST00000421222 227 ntBASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 FAM197Y8-203ENST00000450145 560 ntBASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNI2Q6ZMN8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 AP003733.1-201ENST00000491725 852 ntBASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 TERC-201ENST00000602385 541 ntBASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 FRMD8P1-201ENST00000440433 1524 ntBASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNI2Q6ZMN8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.85■□□□□ 0.45
CCNI2Q6ZMN8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms