Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF3Q3KNV8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF3Q3KNV8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.98□□□□□ -0.01
PCGF3Q3KNV8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF3Q3KNV8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF3Q3KNV8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF3Q3KNV8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 FGFR3P6-201ENST00000457012 610 ntBASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 AC073648.2-201ENST00000510116 352 ntBASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 IGHV3-52-201ENST00000519770 353 ntBASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 AP000867.4-201ENST00000641616 219 ntBASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 AL356309.3-201ENST00000624132 1934 ntBASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 RNF216P1-203ENST00000404404 2427 ntBASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 AC092171.3-201ENST00000610122 2651 ntBASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF3Q3KNV8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 RPS2P28-201ENST00000314255 741 ntBASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 MYCLP1-201ENST00000372451 1075 ntBASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 FAM197Y8-203ENST00000450145 560 ntBASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 AD001527.2-201ENST00000622994 785 ntBASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF3Q3KNV8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF3Q3KNV8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms