Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TSR1Q2NL82 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.52■□□□□ 0.56
TSR1Q2NL82 AC083849.1-201ENST00000615227 514 ntBASIC18.52■□□□□ 0.56
TSR1Q2NL82 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.52■□□□□ 0.56
TSR1Q2NL82 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSR1Q2NL82 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TSR1Q2NL82 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TSR1Q2NL82 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TSR1Q2NL82 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TSR1Q2NL82 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 AL645728.1-201ENST00000366221 2101 ntBASIC18.51■□□□□ 0.55
TSR1Q2NL82 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 SPDYE13P-201ENST00000445314 798 ntBASIC18.51■□□□□ 0.55
TSR1Q2NL82 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 AC011498.5-201ENST00000592027 486 ntBASIC18.51■□□□□ 0.55
TSR1Q2NL82 AC073592.5-201ENST00000624854 528 ntBASIC18.51■□□□□ 0.55
TSR1Q2NL82 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 AL021920.2-201ENST00000624828 1351 ntBASIC18.51■□□□□ 0.55
TSR1Q2NL82 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 AC132938.5-201ENST00000624980 1813 ntBASIC18.51■□□□□ 0.55
TSR1Q2NL82 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSR1Q2NL82 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.51■□□□□ 0.55
TSR1Q2NL82 PCDHA1-201ENST00000378133 2726 ntBASIC18.51■□□□□ 0.55
TSR1Q2NL82 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.5■□□□□ 0.55
TSR1Q2NL82 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR1Q2NL82 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TSR1Q2NL82 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR1Q2NL82 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.49■□□□□ 0.55
TSR1Q2NL82 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.49■□□□□ 0.55
TSR1Q2NL82 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TSR1Q2NL82 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR1Q2NL82 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TSR1Q2NL82 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR1Q2NL82 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR1Q2NL82 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR1Q2NL82 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR1Q2NL82 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms