Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 ME2P1-201ENST00000426028 1970 ntBASIC13.18□□□□□ -0.3
RAB5BP61020 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RAB5BP61020 BEND3P1-201ENST00000421591 1944 ntBASIC13.17□□□□□ -0.3
RAB5BP61020 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB5BP61020 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB5BP61020 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB5BP61020 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 KRT8P3-201ENST00000519669 1449 ntBASIC13.17□□□□□ -0.3
RAB5BP61020 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB5BP61020 AC116407.2-201ENST00000613639 860 ntBASIC13.17□□□□□ -0.3
RAB5BP61020 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RAB5BP61020 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RAB5BP61020 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RAB5BP61020 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RAB5BP61020 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5BP61020 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5BP61020 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
RAB5BP61020 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 AL109954.1-202ENST00000564051 2148 ntBASIC13.16□□□□□ -0.3
RAB5BP61020 AL023775.1-201ENST00000454907 1746 ntBASIC13.16□□□□□ -0.3
RAB5BP61020 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB5BP61020 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB5BP61020 LINC00552-201ENST00000625151 2579 ntBASIC13.16□□□□□ -0.3
RAB5BP61020 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5BP61020 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.16□□□□□ -0.3
RAB5BP61020 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB5BP61020 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.16□□□□□ -0.3
RAB5BP61020 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5BP61020 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 AL160286.2-201ENST00000567150 934 ntBASIC13.16□□□□□ -0.3
RAB5BP61020 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.16□□□□□ -0.3
RAB5BP61020 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 AL121906.2-201ENST00000621597 723 ntBASIC13.16□□□□□ -0.3
RAB5BP61020 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5BP61020 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms