Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.5□□□□□ -0.09
AP3S2P59780 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.49□□□□□ -0.09
AP3S2P59780 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.49□□□□□ -0.09
AP3S2P59780 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.49□□□□□ -0.09
AP3S2P59780 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.49□□□□□ -0.09
AP3S2P59780 AL512604.3-201ENST00000569583 964 ntBASIC14.49□□□□□ -0.09
AP3S2P59780 AC111152.3-201ENST00000569699 673 ntBASIC14.49□□□□□ -0.09
AP3S2P59780 AL157888.1-201ENST00000631930 593 ntBASIC14.49□□□□□ -0.09
AP3S2P59780 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
AP3S2P59780 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S2P59780 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S2P59780 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
AP3S2P59780 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AP3S2P59780 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S2P59780 AC007663.1-201ENST00000438948 1240 ntBASIC14.48□□□□□ -0.09
AP3S2P59780 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S2P59780 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.48□□□□□ -0.09
AP3S2P59780 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 NEK4P2-201ENST00000580004 1012 ntBASIC14.48□□□□□ -0.09
AP3S2P59780 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S2P59780 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 AC004263.2-201ENST00000617183 678 ntBASIC14.48□□□□□ -0.09
AP3S2P59780 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S2P59780 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S2P59780 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S2P59780 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AP3S2P59780 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AP3S2P59780 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S2P59780 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
AP3S2P59780 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S2P59780 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S2P59780 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 LINC02228-204ENST00000642115 2962 ntBASIC14.47□□□□□ -0.09
AP3S2P59780 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
AP3S2P59780 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP3S2P59780 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.47□□□□□ -0.09
AP3S2P59780 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.47□□□□□ -0.09
AP3S2P59780 AC009947.2-201ENST00000444014 672 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms