Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN12P56749 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLDN12P56749 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLDN12P56749 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN12P56749 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 AC112907.2-201ENST00000448639 330 ntBASIC14.68□□□□□ -0.06
CLDN12P56749 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN12P56749 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN12P56749 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CLDN12P56749 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.68□□□□□ -0.06
CLDN12P56749 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN12P56749 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN12P56749 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 AC132938.5-201ENST00000624980 1813 ntBASIC14.68□□□□□ -0.06
CLDN12P56749 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLDN12P56749 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN12P56749 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN12P56749 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN12P56749 AC010491.1-201ENST00000563101 2797 ntBASIC14.68□□□□□ -0.06
CLDN12P56749 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN12P56749 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CLDN12P56749 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 GUSBP12-201ENST00000513727 720 ntBASIC14.67□□□□□ -0.06
CLDN12P56749 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN12P56749 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CLDN12P56749 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN12P56749 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN12P56749 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms