Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC006058.4-201ENST00000624016 1670 ntBASIC16.02■□□□□ 0.16
NR1H2P55055 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H2P55055 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NR1H2P55055 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H2P55055 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H2P55055 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H2P55055 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.02■□□□□ 0.16
NR1H2P55055 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NR1H2P55055 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H2P55055 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H2P55055 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H2P55055 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.02■□□□□ 0.16
NR1H2P55055 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.02■□□□□ 0.16
NR1H2P55055 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.02■□□□□ 0.16
NR1H2P55055 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H2P55055 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
NR1H2P55055 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
NR1H2P55055 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.02■□□□□ 0.15
NR1H2P55055 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NR1H2P55055 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NR1H2P55055 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NR1H2P55055 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.02■□□□□ 0.15
NR1H2P55055 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NR1H2P55055 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NR1H2P55055 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
NR1H2P55055 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NR1H2P55055 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NR1H2P55055 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.02■□□□□ 0.15
NR1H2P55055 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.01■□□□□ 0.15
NR1H2P55055 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.01■□□□□ 0.15
NR1H2P55055 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.01■□□□□ 0.15
NR1H2P55055 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 MTHFR-217ENST00000641820 1569 ntBASIC16.01■□□□□ 0.15
NR1H2P55055 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NR1H2P55055 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.01■□□□□ 0.15
NR1H2P55055 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.01■□□□□ 0.15
NR1H2P55055 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.01■□□□□ 0.15
NR1H2P55055 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.01■□□□□ 0.15
NR1H2P55055 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.01■□□□□ 0.15
NR1H2P55055 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.01■□□□□ 0.15
NR1H2P55055 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.01■□□□□ 0.15
NR1H2P55055 AP002414.4-201ENST00000589764 1148 ntBASIC16.01■□□□□ 0.15
NR1H2P55055 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NR1H2P55055 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.01■□□□□ 0.15
NR1H2P55055 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NR1H2P55055 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
NR1H2P55055 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
NR1H2P55055 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 AL024508.2-201ENST00000607749 1894 ntBASIC16.01■□□□□ 0.15
NR1H2P55055 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.01■□□□□ 0.15
NR1H2P55055 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NR1H2P55055 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
NR1H2P55055 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16■□□□□ 0.15
NR1H2P55055 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 KRT18P1-202ENST00000452408 1331 ntBASIC16■□□□□ 0.15
NR1H2P55055 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16■□□□□ 0.15
NR1H2P55055 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 DDX43P3-201ENST00000441064 443 ntBASIC16■□□□□ 0.15
NR1H2P55055 AP003733.1-201ENST00000491725 852 ntBASIC16■□□□□ 0.15
NR1H2P55055 AC111152.3-201ENST00000569699 673 ntBASIC16■□□□□ 0.15
NR1H2P55055 AC090616.6-201ENST00000582640 721 ntBASIC16■□□□□ 0.15
NR1H2P55055 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16■□□□□ 0.15
NR1H2P55055 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16■□□□□ 0.15
NR1H2P55055 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16■□□□□ 0.15
NR1H2P55055 TCAF2P1-201ENST00000291129 2421 ntBASIC16■□□□□ 0.15
NR1H2P55055 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms