Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SSR1P43307 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.96■□□□□ 0.47
SSR1P43307 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSR1P43307 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.96■□□□□ 0.47
SSR1P43307 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
SSR1P43307 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
SSR1P43307 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SSR1P43307 AC092171.3-201ENST00000610122 2651 ntBASIC17.95■□□□□ 0.46
SSR1P43307 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SSR1P43307 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 AC079776.2-201ENST00000641154 1609 ntBASIC17.95■□□□□ 0.46
SSR1P43307 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SSR1P43307 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.95■□□□□ 0.46
SSR1P43307 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.95■□□□□ 0.46
SSR1P43307 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 LINC00982-205ENST00000420957 435 ntBASIC17.95■□□□□ 0.46
SSR1P43307 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.95■□□□□ 0.46
SSR1P43307 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SSR1P43307 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.95■□□□□ 0.46
SSR1P43307 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 AP005117.1-201ENST00000584346 1413 ntBASIC17.95■□□□□ 0.46
SSR1P43307 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SSR1P43307 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 AC078925.2-201ENST00000624013 1973 ntBASIC17.95■□□□□ 0.46
SSR1P43307 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.95■□□□□ 0.46
SSR1P43307 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SSR1P43307 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SSR1P43307 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.94■□□□□ 0.46
SSR1P43307 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SSR1P43307 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 NORAD-201ENST00000565493 5339 ntBASIC17.94■□□□□ 0.46
SSR1P43307 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.94■□□□□ 0.46
SSR1P43307 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.94■□□□□ 0.46
SSR1P43307 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.94■□□□□ 0.46
SSR1P43307 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 ACTG1P4-201ENST00000425123 1122 ntBASIC17.94■□□□□ 0.46
SSR1P43307 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SSR1P43307 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.94■□□□□ 0.46
SSR1P43307 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SSR1P43307 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SSR1P43307 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.94■□□□□ 0.46
SSR1P43307 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
SSR1P43307 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SSR1P43307 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.94■□□□□ 0.46
SSR1P43307 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SSR1P43307 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.94■□□□□ 0.46
SSR1P43307 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.93■□□□□ 0.46
SSR1P43307 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.93■□□□□ 0.46
SSR1P43307 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.93■□□□□ 0.46
SSR1P43307 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SSR1P43307 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SSR1P43307 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.93■□□□□ 0.46
SSR1P43307 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.93■□□□□ 0.46
SSR1P43307 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.93■□□□□ 0.46
SSR1P43307 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SSR1P43307 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.93■□□□□ 0.46
SSR1P43307 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSR1P43307 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms