Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.1■□□□□ 0.97
COL15A1P39059 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.1■□□□□ 0.97
COL15A1P39059 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
COL15A1P39059 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.1■□□□□ 0.97
COL15A1P39059 AL132655.2-201ENST00000596276 594 ntBASIC21.1■□□□□ 0.97
COL15A1P39059 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.1■□□□□ 0.97
COL15A1P39059 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
COL15A1P39059 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.1■□□□□ 0.97
COL15A1P39059 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 AC073439.1-201ENST00000624121 1774 ntBASIC21.1■□□□□ 0.97
COL15A1P39059 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 CETN4P-206ENST00000642099 2168 ntBASIC21.1■□□□□ 0.97
COL15A1P39059 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.1■□□□□ 0.97
COL15A1P39059 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.1■□□□□ 0.97
COL15A1P39059 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
COL15A1P39059 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.1■□□□□ 0.97
COL15A1P39059 AL008721.1-201ENST00000609964 604 ntBASIC21.1■□□□□ 0.97
COL15A1P39059 AC004840.1-201ENST00000636359 365 ntBASIC21.1■□□□□ 0.97
COL15A1P39059 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL15A1P39059 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COL15A1P39059 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.09■□□□□ 0.97
COL15A1P39059 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
COL15A1P39059 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL15A1P39059 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
COL15A1P39059 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.09■□□□□ 0.97
COL15A1P39059 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.09■□□□□ 0.97
COL15A1P39059 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.09■□□□□ 0.97
COL15A1P39059 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.09■□□□□ 0.97
COL15A1P39059 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
COL15A1P39059 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.09■□□□□ 0.97
COL15A1P39059 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.09■□□□□ 0.97
COL15A1P39059 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
COL15A1P39059 AC013467.2-201ENST00000605472 835 ntBASIC21.09■□□□□ 0.97
COL15A1P39059 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.09■□□□□ 0.97
COL15A1P39059 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
COL15A1P39059 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL15A1P39059 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.09■□□□□ 0.97
COL15A1P39059 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
COL15A1P39059 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL15A1P39059 AC087499.5-201ENST00000452760 1342 ntBASIC21.08■□□□□ 0.97
COL15A1P39059 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
COL15A1P39059 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL15A1P39059 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
COL15A1P39059 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL15A1P39059 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.08■□□□□ 0.97
COL15A1P39059 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL15A1P39059 CU639417.3-201ENST00000624240 1404 ntBASIC21.08■□□□□ 0.97
COL15A1P39059 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL15A1P39059 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL15A1P39059 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
COL15A1P39059 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL15A1P39059 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.08■□□□□ 0.96
COL15A1P39059 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.08■□□□□ 0.96
COL15A1P39059 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.08■□□□□ 0.96
COL15A1P39059 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
COL15A1P39059 RPL37AP1-201ENST00000412502 279 ntBASIC21.08■□□□□ 0.96
COL15A1P39059 AL080243.2-201ENST00000418783 582 ntBASIC21.08■□□□□ 0.96
COL15A1P39059 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.08■□□□□ 0.96
COL15A1P39059 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.08■□□□□ 0.96
COL15A1P39059 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.08■□□□□ 0.96
COL15A1P39059 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL15A1P39059 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.08■□□□□ 0.96
COL15A1P39059 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.08■□□□□ 0.96
COL15A1P39059 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.08■□□□□ 0.96
COL15A1P39059 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms