Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE6BP35913 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6BP35913 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6BP35913 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6BP35913 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6BP35913 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.52■□□□□ 0.88
PDE6BP35913 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6BP35913 MIR658-201ENST00000385210 100 ntBASIC20.52■□□□□ 0.88
PDE6BP35913 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.52■□□□□ 0.88
PDE6BP35913 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.52■□□□□ 0.88
PDE6BP35913 AC044860.1-202ENST00000559481 777 ntBASIC20.52■□□□□ 0.88
PDE6BP35913 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PDE6BP35913 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE6BP35913 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6BP35913 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.52■□□□□ 0.88
PDE6BP35913 HCG11-201ENST00000411553 5696 ntBASIC20.52■□□□□ 0.88
PDE6BP35913 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6BP35913 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE6BP35913 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6BP35913 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.52■□□□□ 0.87
PDE6BP35913 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PDE6BP35913 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.52■□□□□ 0.87
PDE6BP35913 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE6BP35913 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.52■□□□□ 0.87
PDE6BP35913 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
PDE6BP35913 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE6BP35913 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
PDE6BP35913 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDE6BP35913 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE6BP35913 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDE6BP35913 AC114501.2-201ENST00000439631 535 ntBASIC20.51■□□□□ 0.87
PDE6BP35913 SERBP1P3-201ENST00000459980 809 ntBASIC20.51■□□□□ 0.87
PDE6BP35913 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.51■□□□□ 0.87
PDE6BP35913 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE6BP35913 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.51■□□□□ 0.87
PDE6BP35913 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.51■□□□□ 0.87
PDE6BP35913 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE6BP35913 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6BP35913 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE6BP35913 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE6BP35913 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.5■□□□□ 0.87
PDE6BP35913 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.5■□□□□ 0.87
PDE6BP35913 AC055876.2-201ENST00000531834 546 ntBASIC20.5■□□□□ 0.87
PDE6BP35913 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE6BP35913 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.5■□□□□ 0.87
PDE6BP35913 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.5■□□□□ 0.87
PDE6BP35913 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE6BP35913 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE6BP35913 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
PDE6BP35913 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
PDE6BP35913 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDE6BP35913 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE6BP35913 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6BP35913 FZD10-202ENST00000539839 3282 ntBASIC20.49■□□□□ 0.87
PDE6BP35913 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE6BP35913 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PDE6BP35913 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PDE6BP35913 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PDE6BP35913 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.49■□□□□ 0.87
PDE6BP35913 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE6BP35913 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms