Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.93■□□□□ 0.94
RFC4P35249 AC138932.1-201ENST00000534164 6830 ntBASIC20.93■□□□□ 0.94
RFC4P35249 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.93■□□□□ 0.94
RFC4P35249 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFC4P35249 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.93■□□□□ 0.94
RFC4P35249 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
RFC4P35249 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.92■□□□□ 0.94
RFC4P35249 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RFC4P35249 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.92■□□□□ 0.94
RFC4P35249 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.92■□□□□ 0.94
RFC4P35249 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.92■□□□□ 0.94
RFC4P35249 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.92■□□□□ 0.94
RFC4P35249 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.92■□□□□ 0.94
RFC4P35249 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RFC4P35249 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.92■□□□□ 0.94
RFC4P35249 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RFC4P35249 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.92■□□□□ 0.94
RFC4P35249 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RFC4P35249 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
RFC4P35249 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFC4P35249 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RFC4P35249 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.91■□□□□ 0.94
RFC4P35249 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
RFC4P35249 SLC7A15P-201ENST00000424028 1363 ntBASIC20.91■□□□□ 0.94
RFC4P35249 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.91■□□□□ 0.94
RFC4P35249 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.91■□□□□ 0.94
RFC4P35249 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.91■□□□□ 0.94
RFC4P35249 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.91■□□□□ 0.94
RFC4P35249 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFC4P35249 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RFC4P35249 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.9■□□□□ 0.94
RFC4P35249 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.9■□□□□ 0.94
RFC4P35249 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 AC116353.5-201ENST00000638148 1699 ntBASIC20.9■□□□□ 0.94
RFC4P35249 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFC4P35249 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RFC4P35249 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.9■□□□□ 0.94
RFC4P35249 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFC4P35249 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.9■□□□□ 0.94
RFC4P35249 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 SPDYE18-201ENST00000510091 1050 ntBASIC20.9■□□□□ 0.94
RFC4P35249 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.9■□□□□ 0.94
RFC4P35249 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.9■□□□□ 0.94
RFC4P35249 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RFC4P35249 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.9■□□□□ 0.94
RFC4P35249 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.9■□□□□ 0.94
RFC4P35249 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.9■□□□□ 0.94
RFC4P35249 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.9■□□□□ 0.94
RFC4P35249 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFC4P35249 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.9■□□□□ 0.94
RFC4P35249 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFC4P35249 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.89■□□□□ 0.94
RFC4P35249 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RFC4P35249 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFC4P35249 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.89■□□□□ 0.94
RFC4P35249 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RFC4P35249 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.89■□□□□ 0.94
RFC4P35249 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFC4P35249 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.89■□□□□ 0.93
RFC4P35249 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.89■□□□□ 0.93
RFC4P35249 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RFC4P35249 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.89■□□□□ 0.93
RFC4P35249 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.89■□□□□ 0.93
RFC4P35249 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.89■□□□□ 0.93
RFC4P35249 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms