Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA10P31260 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA10P31260 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
HOXA10P31260 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXA10P31260 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HOXA10P31260 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA10P31260 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.28■□□□□ 0.84
HOXA10P31260 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXA10P31260 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA10P31260 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA10P31260 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXA10P31260 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.28■□□□□ 0.84
HOXA10P31260 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA10P31260 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXA10P31260 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXA10P31260 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXA10P31260 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA10P31260 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXA10P31260 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXA10P31260 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA10P31260 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXA10P31260 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA10P31260 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA10P31260 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA10P31260 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA10P31260 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXA10P31260 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HOXA10P31260 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA10P31260 ACA64.2-201ENST00000459014 129 ntBASIC20.27■□□□□ 0.84
HOXA10P31260 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 AC011495.1-201ENST00000498085 584 ntBASIC20.27■□□□□ 0.84
HOXA10P31260 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXA10P31260 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA10P31260 AC099568.2-201ENST00000609194 695 ntBASIC20.27■□□□□ 0.84
HOXA10P31260 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.27■□□□□ 0.84
HOXA10P31260 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXA10P31260 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA10P31260 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXA10P31260 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA10P31260 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HOXA10P31260 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA10P31260 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA10P31260 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA10P31260 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA10P31260 SDHAP3-202ENST00000515467 728 ntBASIC20.26■□□□□ 0.83
HOXA10P31260 AC055876.2-201ENST00000531834 546 ntBASIC20.26■□□□□ 0.83
HOXA10P31260 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXA10P31260 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.26■□□□□ 0.83
HOXA10P31260 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXA10P31260 AL512652.2-201ENST00000625156 1716 ntBASIC20.26■□□□□ 0.83
HOXA10P31260 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
HOXA10P31260 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HOXA10P31260 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
HOXA10P31260 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA10P31260 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HOXA10P31260 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA10P31260 PCDHB17P-201ENST00000539533 2393 ntBASIC20.26■□□□□ 0.83
HOXA10P31260 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA10P31260 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA10P31260 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HOXA10P31260 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA10P31260 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms