Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
BCKDHBP21953 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.5■□□□□ 0.23
BCKDHBP21953 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 HILS1-202ENST00000545329 423 ntBASIC16.5■□□□□ 0.23
BCKDHBP21953 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.5■□□□□ 0.23
BCKDHBP21953 AC010336.2-201ENST00000564226 506 ntBASIC16.5■□□□□ 0.23
BCKDHBP21953 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.5■□□□□ 0.23
BCKDHBP21953 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
BCKDHBP21953 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.5■□□□□ 0.23
BCKDHBP21953 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.5■□□□□ 0.23
BCKDHBP21953 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.5■□□□□ 0.23
BCKDHBP21953 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
BCKDHBP21953 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.5■□□□□ 0.23
BCKDHBP21953 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
BCKDHBP21953 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BCKDHBP21953 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
BCKDHBP21953 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BCKDHBP21953 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BCKDHBP21953 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.49■□□□□ 0.23
BCKDHBP21953 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 FAM220BP-201ENST00000377689 816 ntBASIC16.49■□□□□ 0.23
BCKDHBP21953 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 SLC25A6P5-201ENST00000435663 894 ntBASIC16.49■□□□□ 0.23
BCKDHBP21953 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.49■□□□□ 0.23
BCKDHBP21953 GPR53P-205ENST00000457298 1084 ntBASIC16.49■□□□□ 0.23
BCKDHBP21953 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.49■□□□□ 0.23
BCKDHBP21953 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.49■□□□□ 0.23
BCKDHBP21953 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 AC016396.2-201ENST00000562575 1417 ntBASIC16.49■□□□□ 0.23
BCKDHBP21953 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.49■□□□□ 0.23
BCKDHBP21953 AC105021.1-202ENST00000570572 669 ntBASIC16.49■□□□□ 0.23
BCKDHBP21953 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.49■□□□□ 0.23
BCKDHBP21953 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 SPTSSB-204ENST00000617024 1292 ntBASIC16.49■□□□□ 0.23
BCKDHBP21953 IGHV3-72-202ENST00000621503 303 ntBASIC16.49■□□□□ 0.23
BCKDHBP21953 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.49■□□□□ 0.23
BCKDHBP21953 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BCKDHBP21953 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BCKDHBP21953 AC073439.1-201ENST00000624121 1774 ntBASIC16.49■□□□□ 0.23
BCKDHBP21953 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.48■□□□□ 0.23
BCKDHBP21953 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.48■□□□□ 0.23
BCKDHBP21953 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
BCKDHBP21953 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BCKDHBP21953 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
BCKDHBP21953 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.48■□□□□ 0.23
BCKDHBP21953 DGCR5-201ENST00000399539 862 ntBASIC16.48■□□□□ 0.23
BCKDHBP21953 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.48■□□□□ 0.23
BCKDHBP21953 AL353779.1-201ENST00000434793 351 ntBASIC16.48■□□□□ 0.23
BCKDHBP21953 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.48■□□□□ 0.23
BCKDHBP21953 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.48■□□□□ 0.23
BCKDHBP21953 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
BCKDHBP21953 AC135586.1-201ENST00000539323 574 ntBASIC16.48■□□□□ 0.23
BCKDHBP21953 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
BCKDHBP21953 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.48■□□□□ 0.23
BCKDHBP21953 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
BCKDHBP21953 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCKDHBP21953 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms