Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AP005901.3-202ENST00000581653 237 ntBASIC16.24■□□□□ 0.19
CAPN3P20807 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN3P20807 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN3P20807 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN3P20807 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN3P20807 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CAPN3P20807 AC148477.5-201ENST00000625164 1645 ntBASIC16.23■□□□□ 0.19
CAPN3P20807 LINC00895-201ENST00000629028 1637 ntBASIC16.23■□□□□ 0.19
CAPN3P20807 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN3P20807 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.23■□□□□ 0.19
CAPN3P20807 LINC00265-3P-201ENST00000447588 903 ntBASIC16.23■□□□□ 0.19
CAPN3P20807 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 TPSP2-201ENST00000561760 610 ntBASIC16.23■□□□□ 0.19
CAPN3P20807 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN3P20807 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 AL596257.1-201ENST00000641463 2694 ntBASIC16.23■□□□□ 0.19
CAPN3P20807 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN3P20807 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN3P20807 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
CAPN3P20807 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN3P20807 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CAPN3P20807 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN3P20807 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN3P20807 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CAPN3P20807 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CAPN3P20807 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN3P20807 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN3P20807 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CAPN3P20807 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.22■□□□□ 0.19
CAPN3P20807 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN3P20807 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.22■□□□□ 0.19
CAPN3P20807 AC104819.1-201ENST00000504587 486 ntBASIC16.22■□□□□ 0.19
CAPN3P20807 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN3P20807 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN3P20807 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
CAPN3P20807 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CAPN3P20807 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN3P20807 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN3P20807 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPN3P20807 AC006538.1-201ENST00000567905 1585 ntBASIC16.21■□□□□ 0.19
CAPN3P20807 HLA-A-201ENST00000376802 1334 ntBASIC16.21■□□□□ 0.19
CAPN3P20807 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN3P20807 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN3P20807 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN3P20807 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms