Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
PDE6GP18545 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
PDE6GP18545 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.43□□□□□ -0.74
PDE6GP18545 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PDE6GP18545 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
PDE6GP18545 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PDE6GP18545 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PDE6GP18545 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
PDE6GP18545 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC10.42□□□□□ -0.74
PDE6GP18545 LINC01101-201ENST00000622953 1884 ntBASIC10.42□□□□□ -0.74
PDE6GP18545 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.42□□□□□ -0.74
PDE6GP18545 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
PDE6GP18545 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
PDE6GP18545 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
PDE6GP18545 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.42□□□□□ -0.74
PDE6GP18545 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC10.42□□□□□ -0.74
PDE6GP18545 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
PDE6GP18545 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
PDE6GP18545 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC10.42□□□□□ -0.74
PDE6GP18545 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 KSR1P1-201ENST00000446298 240 ntBASIC10.42□□□□□ -0.74
PDE6GP18545 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC10.42□□□□□ -0.74
PDE6GP18545 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC10.42□□□□□ -0.74
PDE6GP18545 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC10.42□□□□□ -0.74
PDE6GP18545 REEP1-209ENST00000541910 969 ntTSL 2 BASIC10.42□□□□□ -0.74
PDE6GP18545 AC105036.2-201ENST00000569468 176 ntBASIC10.42□□□□□ -0.74
PDE6GP18545 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
PDE6GP18545 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC10.42□□□□□ -0.74
PDE6GP18545 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 AC013268.4-201ENST00000637413 2228 ntBASIC10.42□□□□□ -0.74
PDE6GP18545 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.42□□□□□ -0.74
PDE6GP18545 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC10.42□□□□□ -0.74
PDE6GP18545 SP100-205ENST00000409824 1802 ntTSL 5 BASIC10.42□□□□□ -0.74
PDE6GP18545 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.42□□□□□ -0.74
PDE6GP18545 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.42□□□□□ -0.74
PDE6GP18545 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PDE6GP18545 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 KRT8P47-201ENST00000604727 1398 ntBASIC10.41□□□□□ -0.74
PDE6GP18545 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.41□□□□□ -0.74
PDE6GP18545 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC10.41□□□□□ -0.74
PDE6GP18545 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
PDE6GP18545 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC10.41□□□□□ -0.74
PDE6GP18545 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC10.41□□□□□ -0.74
PDE6GP18545 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PDE6GP18545 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC10.41□□□□□ -0.74
PDE6GP18545 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC10.41□□□□□ -0.74
PDE6GP18545 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC10.41□□□□□ -0.74
PDE6GP18545 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
PDE6GP18545 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC10.41□□□□□ -0.74
PDE6GP18545 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC10.41□□□□□ -0.74
PDE6GP18545 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
PDE6GP18545 AC069544.1-201ENST00000609399 999 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms