Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 KRT18P56-201ENST00000507275 550 ntBASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.02□□□□□ -0.17
IGHV3-43DP0DP04 AL391256.1-201ENST00000443260 1855 ntBASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AC018695.7-201ENST00000624587 2492 ntBASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AL021920.2-201ENST00000624828 1351 ntBASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AP002414.1-201ENST00000391405 1147 ntBASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 SAPCD2P3-201ENST00000455031 850 ntBASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AF238378.1-201ENST00000526806 358 ntBASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AC139887.3-201ENST00000568585 713 ntBASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AL139424.1-201ENST00000607572 797 ntBASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV3-43DP0DP04 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 HLA-A-202ENST00000376806 1854 ntBASIC14□□□□□ -0.17
IGHV3-43DP0DP04 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms