Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.81□□□□□ -0.04
UBCP0CG48 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.81□□□□□ -0.04
UBCP0CG48 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
UBCP0CG48 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.81□□□□□ -0.04
UBCP0CG48 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.81□□□□□ -0.04
UBCP0CG48 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.81□□□□□ -0.04
UBCP0CG48 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.81□□□□□ -0.04
UBCP0CG48 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.81□□□□□ -0.04
UBCP0CG48 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.81□□□□□ -0.04
UBCP0CG48 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.81□□□□□ -0.04
UBCP0CG48 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
UBCP0CG48 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.81□□□□□ -0.04
UBCP0CG48 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.81□□□□□ -0.04
UBCP0CG48 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
UBCP0CG48 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBCP0CG48 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
UBCP0CG48 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
UBCP0CG48 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.8□□□□□ -0.04
UBCP0CG48 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
UBCP0CG48 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.8□□□□□ -0.04
UBCP0CG48 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.8□□□□□ -0.04
UBCP0CG48 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.8□□□□□ -0.04
UBCP0CG48 IGHV3-47-201ENST00000425060 335 ntBASIC14.8□□□□□ -0.04
UBCP0CG48 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.8□□□□□ -0.04
UBCP0CG48 AC074051.2-201ENST00000565115 352 ntBASIC14.8□□□□□ -0.04
UBCP0CG48 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.8□□□□□ -0.04
UBCP0CG48 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.8□□□□□ -0.04
UBCP0CG48 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.8□□□□□ -0.04
UBCP0CG48 AC073592.4-201ENST00000623827 446 ntBASIC14.8□□□□□ -0.04
UBCP0CG48 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.8□□□□□ -0.04
UBCP0CG48 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
UBCP0CG48 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.8□□□□□ -0.04
UBCP0CG48 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBCP0CG48 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.8□□□□□ -0.04
UBCP0CG48 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBCP0CG48 AC007950.2-201ENST00000615045 2347 ntBASIC14.8□□□□□ -0.04
UBCP0CG48 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.8□□□□□ -0.04
UBCP0CG48 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.8□□□□□ -0.04
UBCP0CG48 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
UBCP0CG48 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
UBCP0CG48 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.79□□□□□ -0.04
UBCP0CG48 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
UBCP0CG48 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UBCP0CG48 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.79□□□□□ -0.04
UBCP0CG48 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBCP0CG48 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UBCP0CG48 LINC00982-205ENST00000420957 435 ntBASIC14.79□□□□□ -0.04
UBCP0CG48 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.79□□□□□ -0.04
UBCP0CG48 AP002383.4-201ENST00000442518 975 ntBASIC14.79□□□□□ -0.04
UBCP0CG48 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.79□□□□□ -0.04
UBCP0CG48 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms