Protein–RNA interactions for Protein: P09919

CSF3, Granulocyte colony-stimulating factor, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3P09919 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSF3P09919 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSF3P09919 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSF3P09919 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSF3P09919 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.21■□□□□ 0.03
CSF3P09919 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CSF3P09919 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.21■□□□□ 0.03
CSF3P09919 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.21■□□□□ 0.03
CSF3P09919 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CSF3P09919 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.21■□□□□ 0.03
CSF3P09919 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.21■□□□□ 0.03
CSF3P09919 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CSF3P09919 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.21■□□□□ 0.03
CSF3P09919 MRPL3P1-201ENST00000400109 1033 ntBASIC15.21■□□□□ 0.03
CSF3P09919 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 KRT18P67-201ENST00000432816 1264 ntBASIC15.21■□□□□ 0.03
CSF3P09919 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CSF3P09919 SCARNA2-201ENST00000458748 420 ntBASIC15.21■□□□□ 0.03
CSF3P09919 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.21■□□□□ 0.03
CSF3P09919 AF238378.1-201ENST00000526806 358 ntBASIC15.21■□□□□ 0.03
CSF3P09919 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.21■□□□□ 0.03
CSF3P09919 AC008608.2-201ENST00000606089 416 ntBASIC15.21■□□□□ 0.03
CSF3P09919 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSF3P09919 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSF3P09919 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
CSF3P09919 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 AC144831.1-201ENST00000573312 2656 ntBASIC15.2■□□□□ 0.02
CSF3P09919 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 HLA-A-201ENST00000376802 1334 ntBASIC15.2■□□□□ 0.02
CSF3P09919 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CSF3P09919 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.2■□□□□ 0.02
CSF3P09919 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 AL590627.1-203ENST00000421194 1026 ntBASIC15.2■□□□□ 0.02
CSF3P09919 AP000347.1-202ENST00000435868 847 ntBASIC15.2■□□□□ 0.02
CSF3P09919 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 FAM197Y8-203ENST00000450145 560 ntBASIC15.2■□□□□ 0.02
CSF3P09919 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.2■□□□□ 0.02
CSF3P09919 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.2■□□□□ 0.02
CSF3P09919 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.2■□□□□ 0.02
CSF3P09919 AC116407.2-201ENST00000613639 860 ntBASIC15.2■□□□□ 0.02
CSF3P09919 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 AC117500.6-201ENST00000624871 588 ntBASIC15.2■□□□□ 0.02
CSF3P09919 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CSF3P09919 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.2■□□□□ 0.02
CSF3P09919 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CSF3P09919 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.2■□□□□ 0.02
CSF3P09919 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CSF3P09919 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CSF3P09919 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
CSF3P09919 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSF3P09919 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSF3P09919 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms