Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.21■□□□□ 0.67
TPM2P07951 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM2P07951 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
TPM2P07951 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.21■□□□□ 0.67
TPM2P07951 AL390719.2-201ENST00000606993 987 ntBASIC19.21■□□□□ 0.67
TPM2P07951 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 AC066615.1-201ENST00000640911 628 ntBASIC19.21■□□□□ 0.67
TPM2P07951 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TPM2P07951 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TPM2P07951 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM2P07951 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM2P07951 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM2P07951 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TPM2P07951 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TPM2P07951 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19.2■□□□□ 0.66
TPM2P07951 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.2■□□□□ 0.66
TPM2P07951 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM2P07951 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TPM2P07951 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TPM2P07951 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.2■□□□□ 0.66
TPM2P07951 GUSBP12-201ENST00000513727 720 ntBASIC19.2■□□□□ 0.66
TPM2P07951 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.2■□□□□ 0.66
TPM2P07951 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.2■□□□□ 0.66
TPM2P07951 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.2■□□□□ 0.66
TPM2P07951 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TPM2P07951 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.2■□□□□ 0.66
TPM2P07951 AC097493.4-201ENST00000641197 219 ntBASIC19.2■□□□□ 0.66
TPM2P07951 Z83836.1-201ENST00000624605 1642 ntBASIC19.2■□□□□ 0.66
TPM2P07951 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TPM2P07951 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM2P07951 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TPM2P07951 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM2P07951 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM2P07951 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TPM2P07951 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM2P07951 AC022532.1-201ENST00000624563 1728 ntBASIC19.2■□□□□ 0.66
TPM2P07951 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TPM2P07951 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TPM2P07951 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM2P07951 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TPM2P07951 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM2P07951 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM2P07951 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM2P07951 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM2P07951 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM2P07951 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.19■□□□□ 0.66
TPM2P07951 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM2P07951 AK4P3-201ENST00000418260 669 ntBASIC19.19■□□□□ 0.66
TPM2P07951 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.19■□□□□ 0.66
TPM2P07951 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.19■□□□□ 0.66
TPM2P07951 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.19■□□□□ 0.66
TPM2P07951 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TPM2P07951 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM2P07951 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TPM2P07951 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TPM2P07951 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM2P07951 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM2P07951 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM2P07951 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TPM2P07951 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TPM2P07951 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM2P07951 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms