Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC079328.2-201ENST00000561241 3354 ntBASIC17.24■□□□□ 0.35
MT-CO1P00395 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
MT-CO1P00395 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.24■□□□□ 0.35
MT-CO1P00395 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 MIR1233-2-201ENST00000408138 82 ntBASIC17.24■□□□□ 0.35
MT-CO1P00395 MIR1233-1-201ENST00000408722 82 ntBASIC17.24■□□□□ 0.35
MT-CO1P00395 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-CO1P00395 DNAJB3-201ENST00000446806 729 ntBASIC17.24■□□□□ 0.35
MT-CO1P00395 AC074386.1-202ENST00000463561 864 ntBASIC17.24■□□□□ 0.35
MT-CO1P00395 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.24■□□□□ 0.35
MT-CO1P00395 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.24■□□□□ 0.35
MT-CO1P00395 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
MT-CO1P00395 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.24■□□□□ 0.35
MT-CO1P00395 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.24■□□□□ 0.35
MT-CO1P00395 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-CO1P00395 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-CO1P00395 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-CO1P00395 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MT-CO1P00395 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MT-CO1P00395 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-CO1P00395 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 AC092919.2-201ENST00000623631 1645 ntBASIC17.24■□□□□ 0.35
MT-CO1P00395 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.24■□□□□ 0.35
MT-CO1P00395 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MT-CO1P00395 TNRC18P3-201ENST00000441896 2691 ntBASIC17.24■□□□□ 0.35
MT-CO1P00395 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
MT-CO1P00395 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-CO1P00395 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.23■□□□□ 0.35
MT-CO1P00395 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-CO1P00395 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MT-CO1P00395 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
MT-CO1P00395 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-CO1P00395 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MT-CO1P00395 ALG1L5P-201ENST00000482043 771 ntBASIC17.23■□□□□ 0.35
MT-CO1P00395 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-CO1P00395 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-CO1P00395 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.23■□□□□ 0.35
MT-CO1P00395 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
MT-CO1P00395 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-CO1P00395 MIR3687-2-201ENST00000577708 61 ntBASIC17.23■□□□□ 0.35
MT-CO1P00395 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 MIR3687-1-201ENST00000614492 61 ntBASIC17.23■□□□□ 0.35
MT-CO1P00395 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.23■□□□□ 0.35
MT-CO1P00395 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.23■□□□□ 0.35
MT-CO1P00395 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.23■□□□□ 0.35
MT-CO1P00395 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MT-CO1P00395 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MT-CO1P00395 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-CO1P00395 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-CO1P00395 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MT-CO1P00395 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MT-CO1P00395 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-CO1P00395 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-CO1P00395 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-CO1P00395 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-CO1P00395 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-CO1P00395 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.22■□□□□ 0.35
MT-CO1P00395 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.22■□□□□ 0.35
MT-CO1P00395 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-CO1P00395 AL078644.1-201ENST00000609881 752 ntBASIC17.22■□□□□ 0.35
MT-CO1P00395 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.22■□□□□ 0.35
MT-CO1P00395 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.22■□□□□ 0.35
MT-CO1P00395 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-CO1P00395 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms