Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC4O95801 LINC00554-201ENST00000564841 3011 ntBASIC17.31■□□□□ 0.36
TTC4O95801 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC4O95801 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC4O95801 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC4O95801 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC4O95801 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC4O95801 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TTC4O95801 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC4O95801 IER3-202ENST00000376377 1350 ntBASIC17.3■□□□□ 0.36
TTC4O95801 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC4O95801 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 LINC00895-201ENST00000629028 1637 ntBASIC17.3■□□□□ 0.36
TTC4O95801 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 RCN1P2-201ENST00000398357 915 ntBASIC17.3■□□□□ 0.36
TTC4O95801 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.3■□□□□ 0.36
TTC4O95801 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.3■□□□□ 0.36
TTC4O95801 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC4O95801 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TTC4O95801 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC4O95801 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC4O95801 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TTC4O95801 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC4O95801 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TTC4O95801 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC4O95801 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC4O95801 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC4O95801 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC4O95801 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TTC4O95801 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 AP000867.4-201ENST00000641616 219 ntBASIC17.29■□□□□ 0.36
TTC4O95801 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TTC4O95801 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TTC4O95801 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC4O95801 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC4O95801 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TTC4O95801 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC4O95801 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC4O95801 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TTC4O95801 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC4O95801 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TTC4O95801 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC4O95801 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TTC4O95801 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TTC4O95801 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC4O95801 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms