Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SPDYE10P-202ENST00000612005 668 ntBASIC20.01■□□□□ 0.79
MBD4O95243 SPDYE8P-202ENST00000612377 668 ntBASIC20.01■□□□□ 0.79
MBD4O95243 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MBD4O95243 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
MBD4O95243 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20■□□□□ 0.79
MBD4O95243 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MBD4O95243 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20■□□□□ 0.79
MBD4O95243 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MBD4O95243 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20■□□□□ 0.79
MBD4O95243 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 AC079140.1-201ENST00000508039 487 ntBASIC20■□□□□ 0.79
MBD4O95243 FAM86C2P-203ENST00000528684 1004 ntBASIC20■□□□□ 0.79
MBD4O95243 AC243562.1-201ENST00000560672 389 ntBASIC20■□□□□ 0.79
MBD4O95243 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20■□□□□ 0.79
MBD4O95243 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20■□□□□ 0.79
MBD4O95243 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MBD4O95243 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20■□□□□ 0.79
MBD4O95243 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20■□□□□ 0.79
MBD4O95243 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20■□□□□ 0.79
MBD4O95243 WASH6P-202ENST00000359512 1437 ntBASIC20■□□□□ 0.79
MBD4O95243 KRT8P39-201ENST00000396270 1433 ntBASIC20■□□□□ 0.79
MBD4O95243 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MBD4O95243 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MBD4O95243 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MBD4O95243 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20■□□□□ 0.79
MBD4O95243 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20■□□□□ 0.79
MBD4O95243 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
MBD4O95243 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
MBD4O95243 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
MBD4O95243 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.99■□□□□ 0.79
MBD4O95243 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD4O95243 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD4O95243 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.99■□□□□ 0.79
MBD4O95243 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
MBD4O95243 AC021097.1-201ENST00000607902 574 ntBASIC19.99■□□□□ 0.79
MBD4O95243 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
MBD4O95243 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD4O95243 AC078925.2-201ENST00000624013 1973 ntBASIC19.99■□□□□ 0.79
MBD4O95243 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD4O95243 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD4O95243 AKAP8P1-201ENST00000434743 1349 ntBASIC19.99■□□□□ 0.79
MBD4O95243 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.99■□□□□ 0.79
MBD4O95243 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MBD4O95243 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
MBD4O95243 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MBD4O95243 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MBD4O95243 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.98■□□□□ 0.79
MBD4O95243 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms