Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.94■■□□□ 1.1
LTN1O94822 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.94■■□□□ 1.1
LTN1O94822 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.94■■□□□ 1.1
LTN1O94822 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LTN1O94822 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LTN1O94822 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.94■■□□□ 1.1
LTN1O94822 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.94■■□□□ 1.1
LTN1O94822 AC114501.2-201ENST00000439631 535 ntBASIC21.94■■□□□ 1.1
LTN1O94822 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.94■■□□□ 1.1
LTN1O94822 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.94■■□□□ 1.1
LTN1O94822 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.94■■□□□ 1.1
LTN1O94822 CHCHD2P3-201ENST00000603038 451 ntBASIC21.94■■□□□ 1.1
LTN1O94822 AL645728.1-201ENST00000366221 2101 ntBASIC21.94■■□□□ 1.1
LTN1O94822 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
LTN1O94822 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LTN1O94822 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.93■■□□□ 1.1
LTN1O94822 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.93■■□□□ 1.1
LTN1O94822 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.93■■□□□ 1.1
LTN1O94822 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
LTN1O94822 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
LTN1O94822 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.93■■□□□ 1.1
LTN1O94822 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.93■■□□□ 1.1
LTN1O94822 AP002490.2-201ENST00000524791 560 ntBASIC21.93■■□□□ 1.1
LTN1O94822 AC023310.3-201ENST00000557027 670 ntBASIC21.93■■□□□ 1.1
LTN1O94822 AC100756.1-201ENST00000562736 682 ntBASIC21.93■■□□□ 1.1
LTN1O94822 AC138749.3-201ENST00000567691 622 ntBASIC21.93■■□□□ 1.1
LTN1O94822 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.93■■□□□ 1.1
LTN1O94822 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.93■■□□□ 1.1
LTN1O94822 AC116165.1-201ENST00000611806 668 ntBASIC21.93■■□□□ 1.1
LTN1O94822 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.93■■□□□ 1.1
LTN1O94822 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 AL512652.2-201ENST00000625156 1716 ntBASIC21.93■■□□□ 1.1
LTN1O94822 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LTN1O94822 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LTN1O94822 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.92■■□□□ 1.1
LTN1O94822 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LTN1O94822 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
LTN1O94822 GNAQP1-201ENST00000444815 1067 ntBASIC21.92■■□□□ 1.1
LTN1O94822 AC093004.1-201ENST00000508850 424 ntBASIC21.92■■□□□ 1.1
LTN1O94822 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.92■■□□□ 1.1
LTN1O94822 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.92■■□□□ 1.1
LTN1O94822 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LTN1O94822 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.92■■□□□ 1.1
LTN1O94822 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.92■■□□□ 1.1
LTN1O94822 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LTN1O94822 AL589987.1-201ENST00000453380 819 ntBASIC21.92■■□□□ 1.1
LTN1O94822 GPR53P-205ENST00000457298 1084 ntBASIC21.92■■□□□ 1.1
LTN1O94822 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LTN1O94822 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.92■■□□□ 1.1
LTN1O94822 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 MIR6752-201ENST00000618442 71 ntBASIC21.92■■□□□ 1.1
LTN1O94822 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LTN1O94822 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
LTN1O94822 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LTN1O94822 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LTN1O94822 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LTN1O94822 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms