Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST1O76090 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.6■□□□□ 0.41
BEST1O76090 AGGF1P2-201ENST00000426656 2106 ntBASIC17.6■□□□□ 0.41
BEST1O76090 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
BEST1O76090 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BEST1O76090 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.59■□□□□ 0.41
BEST1O76090 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.59■□□□□ 0.41
BEST1O76090 AC004461.1-201ENST00000412461 403 ntBASIC17.59■□□□□ 0.41
BEST1O76090 TFAMP1-201ENST00000412727 736 ntBASIC17.59■□□□□ 0.41
BEST1O76090 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.59■□□□□ 0.41
BEST1O76090 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BEST1O76090 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 AP002490.2-201ENST00000524791 560 ntBASIC17.59■□□□□ 0.41
BEST1O76090 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.59■□□□□ 0.41
BEST1O76090 AC243562.1-201ENST00000560672 389 ntBASIC17.59■□□□□ 0.41
BEST1O76090 AL135744.1-201ENST00000565098 629 ntBASIC17.59■□□□□ 0.41
BEST1O76090 RARRES2P8-201ENST00000566335 367 ntBASIC17.59■□□□□ 0.41
BEST1O76090 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.59■□□□□ 0.41
BEST1O76090 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.59■□□□□ 0.41
BEST1O76090 AC022145.2-201ENST00000598203 171 ntBASIC17.59■□□□□ 0.41
BEST1O76090 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.59■□□□□ 0.41
BEST1O76090 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.59■□□□□ 0.41
BEST1O76090 AL513210.1-201ENST00000629608 234 ntBASIC17.59■□□□□ 0.41
BEST1O76090 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BEST1O76090 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.59■□□□□ 0.41
BEST1O76090 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BEST1O76090 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
BEST1O76090 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.59■□□□□ 0.41
BEST1O76090 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.59■□□□□ 0.41
BEST1O76090 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST1O76090 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BEST1O76090 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.58■□□□□ 0.41
BEST1O76090 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
BEST1O76090 AC016027.1-202ENST00000607927 1699 ntBASIC17.58■□□□□ 0.41
BEST1O76090 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST1O76090 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.58■□□□□ 0.41
BEST1O76090 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
BEST1O76090 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST1O76090 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.58■□□□□ 0.41
BEST1O76090 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.58■□□□□ 0.41
BEST1O76090 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BEST1O76090 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
BEST1O76090 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.58■□□□□ 0.4
BEST1O76090 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
BEST1O76090 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BEST1O76090 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST1O76090 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST1O76090 AC254562.1-201ENST00000417586 456 ntBASIC17.58■□□□□ 0.4
BEST1O76090 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.58■□□□□ 0.4
BEST1O76090 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST1O76090 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BEST1O76090 TIMM8BP1-201ENST00000452384 211 ntBASIC17.58■□□□□ 0.4
BEST1O76090 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST1O76090 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.58■□□□□ 0.4
BEST1O76090 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.58■□□□□ 0.4
BEST1O76090 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST1O76090 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST1O76090 AC026120.1-201ENST00000611536 926 ntBASIC17.58■□□□□ 0.4
BEST1O76090 AL161645.1-201ENST00000622716 1255 ntBASIC17.58■□□□□ 0.4
BEST1O76090 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST1O76090 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
BEST1O76090 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.58■□□□□ 0.4
BEST1O76090 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST1O76090 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST1O76090 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST1O76090 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
BEST1O76090 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.58■□□□□ 0.4
BEST1O76090 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
BEST1O76090 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BEST1O76090 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BEST1O76090 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BEST1O76090 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BEST1O76090 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.57■□□□□ 0.4
BEST1O76090 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST1O76090 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.57■□□□□ 0.4
BEST1O76090 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST1O76090 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms