Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 AC010491.1-201ENST00000563101 2797 ntBASIC15.34■□□□□ 0.05
CLPXO76031 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CLPXO76031 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPXO76031 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPXO76031 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CLPXO76031 AL391256.1-201ENST00000443260 1855 ntBASIC15.33■□□□□ 0.05
CLPXO76031 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPXO76031 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPXO76031 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPXO76031 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.33■□□□□ 0.05
CLPXO76031 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLPXO76031 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPXO76031 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.33■□□□□ 0.05
CLPXO76031 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPXO76031 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CLPXO76031 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPXO76031 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 BX664615.1-201ENST00000443558 458 ntBASIC15.33■□□□□ 0.04
CLPXO76031 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.33■□□□□ 0.04
CLPXO76031 ECEL1P2-202ENST00000465689 757 ntBASIC15.33■□□□□ 0.04
CLPXO76031 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.33■□□□□ 0.04
CLPXO76031 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLPXO76031 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 AC006011.2-201ENST00000621313 1158 ntBASIC15.33■□□□□ 0.04
CLPXO76031 CR769767.2-201ENST00000622735 460 ntBASIC15.33■□□□□ 0.04
CLPXO76031 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.33■□□□□ 0.04
CLPXO76031 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 CICP4-201ENST00000447359 2812 ntBASIC15.33■□□□□ 0.04
CLPXO76031 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 LINC00167-201ENST00000530583 1419 ntBASIC15.33■□□□□ 0.04
CLPXO76031 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.33■□□□□ 0.04
CLPXO76031 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPXO76031 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPXO76031 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CLPXO76031 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLPXO76031 INGX-201ENST00000359239 846 ntBASIC15.32■□□□□ 0.04
CLPXO76031 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
CLPXO76031 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLPXO76031 LINC01238-205ENST00000567549 1107 ntBASIC15.32■□□□□ 0.04
CLPXO76031 WWOX-216ENST00000569818 525 ntBASIC15.32■□□□□ 0.04
CLPXO76031 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.32■□□□□ 0.04
CLPXO76031 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.32■□□□□ 0.04
CLPXO76031 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CLPXO76031 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CLPXO76031 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.32■□□□□ 0.04
CLPXO76031 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms