Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF40O75150 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 AC092171.3-201ENST00000610122 2651 ntBASIC18.22■□□□□ 0.51
RNF40O75150 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF40O75150 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF40O75150 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF40O75150 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF40O75150 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF40O75150 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RNF40O75150 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.22■□□□□ 0.51
RNF40O75150 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF40O75150 AC112698.1-201ENST00000510299 916 ntBASIC18.22■□□□□ 0.51
RNF40O75150 AC034105.1-201ENST00000563488 319 ntBASIC18.22■□□□□ 0.51
RNF40O75150 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.22■□□□□ 0.51
RNF40O75150 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 AL356488.2-201ENST00000602755 427 ntBASIC18.22■□□□□ 0.51
RNF40O75150 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RNF40O75150 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF40O75150 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF40O75150 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF40O75150 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF40O75150 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF40O75150 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RNF40O75150 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
RNF40O75150 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF40O75150 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF40O75150 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 AC005104.2-201ENST00000427818 678 ntBASIC18.21■□□□□ 0.51
RNF40O75150 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF40O75150 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF40O75150 NKAPP1-205ENST00000585790 367 ntBASIC18.21■□□□□ 0.51
RNF40O75150 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF40O75150 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 FAM197Y3-203ENST00000618346 717 ntBASIC18.21■□□□□ 0.51
RNF40O75150 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF40O75150 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF40O75150 AL513523.2-202ENST00000427283 2040 ntBASIC18.21■□□□□ 0.51
RNF40O75150 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF40O75150 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF40O75150 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF40O75150 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF40O75150 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF40O75150 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF40O75150 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
RNF40O75150 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF40O75150 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF40O75150 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF40O75150 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF40O75150 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RNF40O75150 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RNF40O75150 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 PAUPAR-201ENST00000630360 2965 ntBASIC18.2■□□□□ 0.5
RNF40O75150 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF40O75150 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF40O75150 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF40O75150 AC116353.5-201ENST00000638148 1699 ntBASIC18.2■□□□□ 0.5
RNF40O75150 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.2■□□□□ 0.5
RNF40O75150 RNA5SP415-201ENST00000517246 115 ntBASIC18.2■□□□□ 0.5
RNF40O75150 DUTP2-201ENST00000519164 463 ntBASIC18.2■□□□□ 0.5
RNF40O75150 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF40O75150 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF40O75150 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RNF40O75150 Z83851.2-201ENST00000609564 659 ntBASIC18.2■□□□□ 0.5
RNF40O75150 AC008735.5-201ENST00000623544 497 ntBASIC18.2■□□□□ 0.5
RNF40O75150 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF40O75150 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms