Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PEX1O43933 POM121L3P-201ENST00000419331 1163 ntBASIC16.48■□□□□ 0.23
PEX1O43933 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.48■□□□□ 0.23
PEX1O43933 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PEX1O43933 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.48■□□□□ 0.23
PEX1O43933 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.48■□□□□ 0.23
PEX1O43933 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.48■□□□□ 0.23
PEX1O43933 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.48■□□□□ 0.23
PEX1O43933 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.48■□□□□ 0.23
PEX1O43933 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.48■□□□□ 0.23
PEX1O43933 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.48■□□□□ 0.23
PEX1O43933 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PEX1O43933 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.48■□□□□ 0.23
PEX1O43933 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.47■□□□□ 0.23
PEX1O43933 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PEX1O43933 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.47■□□□□ 0.23
PEX1O43933 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.47■□□□□ 0.23
PEX1O43933 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.47■□□□□ 0.23
PEX1O43933 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PEX1O43933 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.47■□□□□ 0.23
PEX1O43933 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PEX1O43933 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PEX1O43933 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.47■□□□□ 0.23
PEX1O43933 AC092053.1-201ENST00000605787 1936 ntBASIC16.47■□□□□ 0.23
PEX1O43933 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.47■□□□□ 0.23
PEX1O43933 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.46■□□□□ 0.23
PEX1O43933 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.46■□□□□ 0.23
PEX1O43933 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.46■□□□□ 0.23
PEX1O43933 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.46■□□□□ 0.23
PEX1O43933 MTCL1P1-201ENST00000446207 792 ntBASIC16.46■□□□□ 0.23
PEX1O43933 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.46■□□□□ 0.23
PEX1O43933 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.46■□□□□ 0.23
PEX1O43933 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.46■□□□□ 0.23
PEX1O43933 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.46■□□□□ 0.23
PEX1O43933 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.46■□□□□ 0.23
PEX1O43933 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PEX1O43933 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PEX1O43933 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms