Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AC015911.4-201ENST00000588022 1070 ntBASIC16.8■□□□□ 0.28
MID1O15344 AC027307.2-201ENST00000591252 911 ntBASIC16.8■□□□□ 0.28
MID1O15344 AC005498.2-205ENST00000593218 784 ntBASIC16.8■□□□□ 0.28
MID1O15344 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 AL136317.3-201ENST00000618497 906 ntBASIC16.8■□□□□ 0.28
MID1O15344 AP001059.3-201ENST00000619053 235 ntBASIC16.8■□□□□ 0.28
MID1O15344 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.8■□□□□ 0.28
MID1O15344 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.8■□□□□ 0.28
MID1O15344 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MID1O15344 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MID1O15344 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
MID1O15344 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 AC141586.5-201ENST00000624546 2050 ntBASIC16.79■□□□□ 0.28
MID1O15344 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 AC092068.3-201ENST00000587894 2016 ntBASIC16.79■□□□□ 0.28
MID1O15344 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 TUBB8P12-201ENST00000308911 1335 ntBASIC16.79■□□□□ 0.28
MID1O15344 TUBB7P-202ENST00000428444 1305 ntBASIC16.79■□□□□ 0.28
MID1O15344 TUBB8P7-204ENST00000567960 1332 ntBASIC16.79■□□□□ 0.28
MID1O15344 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.79■□□□□ 0.28
MID1O15344 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.79■□□□□ 0.28
MID1O15344 SLC25A39P2-201ENST00000537614 270 ntBASIC16.79■□□□□ 0.28
MID1O15344 DUX4L27-201ENST00000554796 1261 ntBASIC16.79■□□□□ 0.28
MID1O15344 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.79■□□□□ 0.28
MID1O15344 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.79■□□□□ 0.28
MID1O15344 AC008267.7-201ENST00000624570 1194 ntBASIC16.79■□□□□ 0.28
MID1O15344 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.79■□□□□ 0.28
MID1O15344 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.79■□□□□ 0.28
MID1O15344 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MID1O15344 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MID1O15344 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MID1O15344 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 FAM8A3P-201ENST00000427218 844 ntBASIC16.78■□□□□ 0.28
MID1O15344 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 AC069262.1-201ENST00000539058 672 ntBASIC16.78■□□□□ 0.28
MID1O15344 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 AL512356.2-201ENST00000546955 174 ntBASIC16.78■□□□□ 0.28
MID1O15344 SPCS2P1-201ENST00000561636 679 ntBASIC16.78■□□□□ 0.28
MID1O15344 AC026150.2-201ENST00000564693 1156 ntBASIC16.78■□□□□ 0.28
MID1O15344 AP000842.3-202ENST00000569238 1080 ntBASIC16.78■□□□□ 0.28
MID1O15344 AC021097.1-201ENST00000607902 574 ntBASIC16.78■□□□□ 0.28
MID1O15344 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.78■□□□□ 0.28
MID1O15344 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
MID1O15344 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
MID1O15344 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MID1O15344 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.78■□□□□ 0.28
MID1O15344 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.78■□□□□ 0.28
MID1O15344 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.78■□□□□ 0.28
MID1O15344 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MID1O15344 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.78■□□□□ 0.28
MID1O15344 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms