Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM235A6NFC5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM235A6NFC5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM235A6NFC5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM235A6NFC5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM235A6NFC5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 AC117947.1-201ENST00000427448 529 ntBASIC14.42□□□□□ -0.1
TMEM235A6NFC5 HLA-J-202ENST00000469281 1241 ntBASIC14.42□□□□□ -0.1
TMEM235A6NFC5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 AL592071.1-201ENST00000611956 408 ntBASIC14.42□□□□□ -0.1
TMEM235A6NFC5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 DBET-201ENST00000630918 3363 ntBASIC14.42□□□□□ -0.1
TMEM235A6NFC5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 FLJ16779-201ENST00000612722 7638 ntBASIC14.42□□□□□ -0.1
TMEM235A6NFC5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM235A6NFC5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 AC092850.2-201ENST00000623821 2697 ntBASIC14.41□□□□□ -0.1
TMEM235A6NFC5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 AC087499.1-201ENST00000418141 1075 ntBASIC14.41□□□□□ -0.1
TMEM235A6NFC5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 BX664615.1-201ENST00000443558 458 ntBASIC14.41□□□□□ -0.1
TMEM235A6NFC5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 HYMAI.1-201ENST00000620949 238 ntBASIC14.41□□□□□ -0.1
TMEM235A6NFC5 AC124864.1-201ENST00000623408 392 ntBASIC14.41□□□□□ -0.1
TMEM235A6NFC5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM235A6NFC5 LINC00895-201ENST00000629028 1637 ntBASIC14.41□□□□□ -0.1
TMEM235A6NFC5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms