Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 AC123567.1-201ENST00000548294 1261 ntBASIC19.3■□□□□ 0.68
SSC5DA1L4H1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 MYCLP2-201ENST00000449268 967 ntBASIC19.29■□□□□ 0.68
SSC5DA1L4H1 AC092658.1-201ENST00000505836 891 ntBASIC19.29■□□□□ 0.68
SSC5DA1L4H1 AC008735.3-201ENST00000596646 500 ntBASIC19.29■□□□□ 0.68
SSC5DA1L4H1 WFDC1-204ENST00000613603 549 ntBASIC19.29■□□□□ 0.68
SSC5DA1L4H1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.29■□□□□ 0.68
SSC5DA1L4H1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.28■□□□□ 0.68
SSC5DA1L4H1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 AL589702.1-201ENST00000641229 1509 ntBASIC19.28■□□□□ 0.68
SSC5DA1L4H1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSC5DA1L4H1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 AC092337.1-201ENST00000568699 1129 ntBASIC19.27■□□□□ 0.68
SSC5DA1L4H1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms