Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 STK19B-204ENST00000512515 211 ntBASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC116407.4-201ENST00000623319 1061 ntBASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF103-CHMP3A0A140T963 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC233702.3-201ENST00000578656 1387 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC003669.1-201ENST00000334569 611 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 KLF4P1-201ENST00000412782 1185 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 PCED1CP-201ENST00000419887 785 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 FAM210CP-201ENST00000445714 574 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 Z69720.1-201ENST00000601483 472 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC105917.1-201ENST00000506637 2539 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC009336.1-201ENST00000608941 1553 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 TP73-AS1-210ENST00000637775 1455 ntBASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF103-CHMP3A0A140T963 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms