Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 LINC02012-201ENST00000608206 1725 ntBASIC15.97■□□□□ 0.15
CLCA3PQ9Y6N3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 CRYGEP-201ENST00000412192 528 ntBASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 PRSS29P-201ENST00000440800 595 ntBASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 AC004790.2-201ENST00000623588 572 ntBASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCA3PQ9Y6N3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCA3PQ9Y6N3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 PAWRP1-201ENST00000451083 565 ntBASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 AC034105.1-201ENST00000563488 319 ntBASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 AC010654.1-201ENST00000615722 808 ntBASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms