Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC006449.5-201ENST00000610658 2098 ntBASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB3Q9Y5G1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 AC092068.3-201ENST00000587894 2016 ntBASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 HLA-A-201ENST00000376802 1334 ntBASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 FAM197Y8-203ENST00000450145 560 ntBASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB3Q9Y5G1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AP005117.1-201ENST00000584346 1413 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AC026691.1-201ENST00000602502 2017 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 MRPL3P1-201ENST00000400109 1033 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AP001005.1-201ENST00000571755 1248 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 BX640515.1-201ENST00000617215 977 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AC073592.4-201ENST00000623827 446 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AC079776.2-201ENST00000641154 1609 ntBASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB3Q9Y5G1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 RPS2P28-201ENST00000314255 741 ntBASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 PRYP5-201ENST00000451909 266 ntBASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGB3Q9Y5G1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms