Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 AC087641.1-201ENST00000557561 1021 ntBASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 LINC00895-201ENST00000629028 1637 ntBASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 AL671710.1-201ENST00000610245 2349 ntBASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AL603756.1-201ENST00000606511 2163 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 HCG4-201ENST00000418983 998 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AP002490.2-201ENST00000524791 560 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 PDPK2P-202ENST00000562415 1191 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AL031432.2-201ENST00000566714 459 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AL928711.1-201ENST00000570165 459 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AL645728.2-201ENST00000641974 660 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 AC011676.5-201ENST00000624864 2660 ntBASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGC4Q9Y5F7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 AC074386.1-202ENST00000463561 864 ntBASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 AC002347.1-201ENST00000569543 541 ntBASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 AC013467.2-201ENST00000605472 835 ntBASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 AP001350.2-201ENST00000625104 1094 ntBASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 AC020916.1-201ENST00000587762 1774 ntBASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 NKILA-202ENST00000614771 2598 ntBASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGC4Q9Y5F7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGC4Q9Y5F7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGC4Q9Y5F7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGC4Q9Y5F7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGC4Q9Y5F7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms