Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 AC243591.1-201ENST00000452967 1364 ntBASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 CYP2T1P-202ENST00000641596 2535 ntBASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF11Q9Y3C5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 AC105917.1-201ENST00000506637 2539 ntBASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 FGFR3P6-201ENST00000457012 610 ntBASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 SART3-203ENST00000546611 1184 ntBASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 AC008608.2-201ENST00000606089 416 ntBASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF11Q9Y3C5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RNF11Q9Y3C5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
RNF11Q9Y3C5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RNF11Q9Y3C5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 TERC-201ENST00000602385 541 ntBASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 AC012313.10-201ENST00000623509 926 ntBASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF11Q9Y3C5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF11Q9Y3C5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms