Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 AL121956.5-201ENST00000625261 221 ntBASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 AC022188.1-201ENST00000620960 1664 ntBASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
MRPS28Q9Y2Q9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 SPDYE21P-201ENST00000413323 827 ntBASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 AC006538.1-201ENST00000567905 1585 ntBASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPS28Q9Y2Q9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 NSUN5P1-202ENST00000421140 1535 ntBASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 NSUN5P2-203ENST00000457352 1529 ntBASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 AC005332.1-201ENST00000577698 1310 ntBASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 RCN1P2-201ENST00000398357 915 ntBASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPS28Q9Y2Q9 KRT17P6-201ENST00000453795 1220 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms