Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 AL591684.3-201ENST00000605187 298 ntBASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 AL513523.2-202ENST00000427283 2040 ntBASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 MIR5100-201ENST00000579544 119 ntBASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 HLA-A-202ENST00000376806 1854 ntBASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIN7CQ9NUP9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 DUSP5P1-201ENST00000441325 1139 ntBASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 AC012313.10-201ENST00000623509 926 ntBASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms