Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.39■□□□□ 0.05
CHD8Q9HCK8 AC008687.7-202ENST00000637404 953 ntBASIC15.39■□□□□ 0.05
CHD8Q9HCK8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 PKD1P6-201ENST00000343738 4769 ntBASIC15.39■□□□□ 0.05
CHD8Q9HCK8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 AC068587.3-201ENST00000526613 355 ntBASIC15.38■□□□□ 0.05
CHD8Q9HCK8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 TIMM17BP1-201ENST00000545713 516 ntBASIC15.38■□□□□ 0.05
CHD8Q9HCK8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHD8Q9HCK8 CROCCP3-202ENST00000420820 1947 ntBASIC15.37■□□□□ 0.05
CHD8Q9HCK8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 AL355864.2-201ENST00000447420 863 ntBASIC15.37■□□□□ 0.05
CHD8Q9HCK8 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 PTP4A1P2-201ENST00000546033 454 ntBASIC15.37■□□□□ 0.05
CHD8Q9HCK8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 MIR1227-201ENST00000408484 88 ntBASIC15.37■□□□□ 0.05
CHD8Q9HCK8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 MIR6756-201ENST00000616240 63 ntBASIC15.37■□□□□ 0.05
CHD8Q9HCK8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms