Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.59■□□□□ 0.41
SMOQ99835 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 AL512652.2-201ENST00000625156 1716 ntBASIC17.59■□□□□ 0.41
SMOQ99835 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.59■□□□□ 0.41
SMOQ99835 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SMOQ99835 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMOQ99835 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.59■□□□□ 0.41
SMOQ99835 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SMOQ99835 AC004461.1-201ENST00000412461 403 ntBASIC17.59■□□□□ 0.41
SMOQ99835 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.59■□□□□ 0.41
SMOQ99835 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.59■□□□□ 0.41
SMOQ99835 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.59■□□□□ 0.41
SMOQ99835 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.59■□□□□ 0.41
SMOQ99835 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SMOQ99835 AC243562.1-201ENST00000560672 389 ntBASIC17.59■□□□□ 0.41
SMOQ99835 AL135744.1-201ENST00000565098 629 ntBASIC17.59■□□□□ 0.41
SMOQ99835 AC021097.1-201ENST00000607902 574 ntBASIC17.59■□□□□ 0.41
SMOQ99835 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.59■□□□□ 0.41
SMOQ99835 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.59■□□□□ 0.41
SMOQ99835 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMOQ99835 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SMOQ99835 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMOQ99835 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMOQ99835 AC016027.1-202ENST00000607927 1699 ntBASIC17.58■□□□□ 0.41
SMOQ99835 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMOQ99835 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMOQ99835 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.58■□□□□ 0.41
SMOQ99835 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SMOQ99835 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMOQ99835 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMOQ99835 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.58■□□□□ 0.41
SMOQ99835 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMOQ99835 AC106886.4-201ENST00000623557 2502 ntBASIC17.58■□□□□ 0.41
SMOQ99835 WASH6P-202ENST00000359512 1437 ntBASIC17.58■□□□□ 0.41
SMOQ99835 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SMOQ99835 AKAP8P1-201ENST00000434743 1349 ntBASIC17.58■□□□□ 0.4
SMOQ99835 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.58■□□□□ 0.4
SMOQ99835 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SMOQ99835 CNN2P11-201ENST00000429351 262 ntBASIC17.58■□□□□ 0.4
SMOQ99835 TIMM8BP1-201ENST00000452384 211 ntBASIC17.58■□□□□ 0.4
SMOQ99835 FAM86C2P-203ENST00000528684 1004 ntBASIC17.58■□□□□ 0.4
SMOQ99835 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.58■□□□□ 0.4
SMOQ99835 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.58■□□□□ 0.4
SMOQ99835 AC079781.4-201ENST00000641908 219 ntBASIC17.58■□□□□ 0.4
SMOQ99835 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.58■□□□□ 0.4
SMOQ99835 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SMOQ99835 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SMOQ99835 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SMOQ99835 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SMOQ99835 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SMOQ99835 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.58■□□□□ 0.4
SMOQ99835 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SMOQ99835 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.58■□□□□ 0.4
SMOQ99835 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SMOQ99835 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SMOQ99835 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMOQ99835 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.57■□□□□ 0.4
SMOQ99835 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SMOQ99835 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SMOQ99835 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMOQ99835 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SMOQ99835 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.57■□□□□ 0.4
SMOQ99835 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.57■□□□□ 0.4
SMOQ99835 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.57■□□□□ 0.4
SMOQ99835 SPDYE11-202ENST00000450699 704 ntBASIC17.57■□□□□ 0.4
SMOQ99835 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms