Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 IGHV3-42-201ENST00000520410 361 ntBASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 AC010336.2-201ENST00000564226 506 ntBASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 AC092364.2-202ENST00000597012 1073 ntBASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 AC003101.2-201ENST00000612557 442 ntBASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 RNF216P1-203ENST00000404404 2427 ntBASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP2Q96SN8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 MTND6P24-201ENST00000440466 518 ntBASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 CRB3P1-201ENST00000449338 276 ntBASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AC009477.1-201ENST00000452936 217 ntBASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AL353705.2-201ENST00000428243 662 ntBASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AL512361.1-201ENST00000554200 418 ntBASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP2Q96SN8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP2Q96SN8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms