Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 AC010491.1-201ENST00000563101 2797 ntBASIC14.53□□□□□ -0.08
CMTM3Q96MX0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.53□□□□□ -0.08
CMTM3Q96MX0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 AL136379.1-201ENST00000623471 2642 ntBASIC14.52□□□□□ -0.08
CMTM3Q96MX0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.52□□□□□ -0.08
CMTM3Q96MX0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMTM3Q96MX0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 AP002414.1-201ENST00000391405 1147 ntBASIC14.52□□□□□ -0.09
CMTM3Q96MX0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 ACTG1P4-201ENST00000425123 1122 ntBASIC14.52□□□□□ -0.09
CMTM3Q96MX0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 NAPSB-206ENST00000562112 1266 ntBASIC14.52□□□□□ -0.09
CMTM3Q96MX0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMTM3Q96MX0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 POU5F1P6-201ENST00000466990 990 ntBASIC14.51□□□□□ -0.09
CMTM3Q96MX0 AC098590.1-201ENST00000468126 897 ntBASIC14.51□□□□□ -0.09
CMTM3Q96MX0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 AL031432.5-201ENST00000641059 760 ntBASIC14.51□□□□□ -0.09
CMTM3Q96MX0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.51□□□□□ -0.09
CMTM3Q96MX0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms